The detailed information of tRNA gene sequence


Sequence ID>ENV08000031
Genome IDABLU01053340
Search identical group
Phylum/Classmicrobial fraction from oxidized sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 116
End posion on genome 26
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnncttc
tRNA gene sequence 
GGAGGGTTGGCAGAGCGGTTGAATGCACCGGTCTTGAAAACCGGCAAGGGTTAATAGCCC
TTCCAGGGTTCGAATCCCTGACCCTCCGCCA
Downstream region at tRNA end position 
ccagatcggt
Secondary structure (Cloverleaf model)
>ENV08000031	Ser	TGA
                   c      GCCA ccagatcggt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CAAGGGTTAATAGCCCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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