The detailed information of tRNA gene sequence


Sequence ID>ENV08000038
Genome IDABLU01069156
Search identical group
Phylum/Classmicrobial fraction from oxidized sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 22
End posion on genome 111
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgcgtccgc
tRNA gene sequence 
GGAGACGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAGGCCCGGAAGGGTC
TCGTGGGTTCGAATCCCATCGTCTCCGCCA
Downstream region at tRNA end position 
ttcatcnnnn
Secondary structure (Cloverleaf model)
>ENV08000038	Ser	GCT
                   c      GCCA ttcatcnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCCCGGAAGGGTCTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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