The detailed information of tRNA gene sequence


Sequence ID>ENV08000043
Genome IDABLU01075727
Search identical group
Phylum/Classmicrobial fraction from oxidized sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 100
End posion on genome 24
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caacttgaat
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGCTAGAGCCACCGGCTCATAACCGGTCGGTCCCTGGTTCGAG
TCCAGGTAGGCCCACCA
Downstream region at tRNA end position 
caataataac
Secondary structure (Cloverleaf model)
>ENV08000043	Met	CAT
                   t      ACCA caataataac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        C     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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