The detailed information of tRNA gene sequence


Sequence ID>ENV08000044
Genome IDABLU01076868
Search identical group
Phylum/Classmicrobial fraction from oxidized sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 94
End posion on genome 18
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atcaaaatta
tRNA gene sequence 
GCAGCGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCGCTGCGCCA
Downstream region at tRNA end position 
acttcgtgtg
Secondary structure (Cloverleaf model)
>ENV08000044	Asp	GTC
                   a      GCCA acttcgtgtg
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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