The detailed information of tRNA gene sequence


Sequence ID>ENV08000045
Genome IDABLU01078590
Search identical group
Phylum/Classmicrobial fraction from oxidized sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 100
End posion on genome 25
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ggggggtccg
tRNA gene sequence 
GGGGCGTTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGGTTCGATC
CCGATACGCTCCACCA
Downstream region at tRNA end position 
ttcccaggtg
Secondary structure (Cloverleaf model)
>ENV08000045	Ala	TGC
                   g      ACCA ttcccaggtg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     T - A          C T
                    T     T A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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