The detailed information of tRNA gene sequence


Sequence ID>ENV08000060
Genome IDABLU01100664
Search identical group
Phylum/Classmicrobial fraction from oxidized sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 2
End posion on genome 86
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GCCCTGGTGGCGGAATTGGTAGACGCGCTGGCTTGAGGGGTCAGTTCCCGTTAGGGAGTG
CTAGTTCGACTCTAGTCCAGGGCACtt
Downstream region at tRNA end position 
ttagccttgt
Secondary structure (Cloverleaf model)
>ENV08000060	Leu	GAG
                   t      ACtt ttagccttgt
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T C
                    T     T G A T C     A
      T A A        G      + | | | |     G
    T       G G C G       G C T A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTCCCGTTAGGGAGT
                    C - G
                    T - A
                    G - C
                    G + T
                    C - G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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