The detailed information of tRNA gene sequence


Sequence ID>ENV08000079
Genome IDABLU01165881
Search identical group
Phylum/Classmicrobial fraction from oxidized sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 86
End posion on genome 10
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgtaatacat
tRNA gene sequence 
GGCGATGTAGCTCAGCCGGTTAGAGCGCACGGCTCATATCCGTGGTGTCCGGGGTTCAAG
TCCCTGCATCGCCACCA
Downstream region at tRNA end position 
tacacaaaan
Secondary structure (Cloverleaf model)
>ENV08000079	Met	CAT
                   t      ACCA tacacaaaan
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     G T C C C     A
      C G A        A      | + | | |     A
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     GTGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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