The detailed information of tRNA gene sequence


Sequence ID>ENV08000097
Genome IDABLV01034198
Search identical group
Phylum/Classmicrobial fraction from reduced sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 3
End posion on genome 94
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnttC
tRNA gene sequence 
CGAAATGTGGATGAGTGGTTTAAATCACTTCCCTGCTAAGGAAGCGTGTTATAAAAAATA
GCACCGTGGGTTCGAATCCCACCATTTCCGAaa
Downstream region at tRNA end position 
tgtggatgag
Secondary structure (Cloverleaf model)
>ENV08000097	Ser	GCT
                   C      GAaa tgtggatgag
                     C   C
                     G - C
                     A - T
                     A - T
                     A - T
                     T - A
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G T G G G     C
    G         | | |                 T T
    T       A A T C
      T T A        A     CGTGTTATAAAAAATAGCACC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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