The detailed information of tRNA gene sequence


Sequence ID>ENV08000098
Genome IDABLV01048901
Search identical group
Phylum/Classmicrobial fraction from reduced sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 9
End posion on genome 79
Amino Acid Pseudo
Anticodon TTC
Upstream region at tRNA start position 
nncacattaa
tRNA gene sequence 
AAACCCTTCGTCTAATGGTAGGACGTTAACCTTTCACGTTAAGAATATGAGTTCGATTCT
CATAGGGTTCAgtg
Downstream region at tRNA end position 
gcaaaatacc
Secondary structure (Cloverleaf model)
>ENV08000098	Pseudo	TTC
                   a      Agtg gcaaaatacc
                     A   C
                     A - T
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T A C T C     A
        A A        C      | | | | |     G
      T     T C T G       A T G A G     C
      G     + | | |                 T T
      G     G G A C
        T A        G     GAAT
                    T - A
                    T - A
                    A - T
                    A - T
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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