The detailed information of tRNA gene sequence


Sequence ID>WENV183661208
Genome IDORJL010089064
Search identical group
Phylum/Class[ORJL] groundwater metagenome; groundwater
Species
Start position on genome 222
End posion on genome 319
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttctattttc
tRNA gene sequence 
GGGAGTGCATGGGCTCTGGTGGGCTTCACGGACTTCAAATCCGTTGTCCTGGCACTTTCG
TGCCGGGAGGTGGGTTCGACTCCCGCGCACTCCCGCCA
Downstream region at tRNA end position 
tatctagcgc
Secondary structure (Cloverleaf model)
>WENV183661208	SeC	TCA
                   c      GCCA tatctagcgc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T C
                    A     C G C C C     A
      T C T        T      | + | | |     G
    G       C G G G       G T G G G     C
    G       | | + +                 T T
    T       G C T T
      G G          C     TGTCCTGGCACTTTCGTGCCGGGAG
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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