The detailed information of tRNA gene sequence


Sequence ID>WENV183661882
Genome IDORJL010144202
Search identical group
Phylum/Class[ORJL] groundwater metagenome; groundwater
Species
Start position on genome 256
End posion on genome 163
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggctcagctc
tRNA gene sequence 
GGAGCGGCATGGGCCCGGTGGCCCAGCCGGTCTTCAAAACCGGTGAGGTCGTGTAACCCA
CGGCTGGGTAGGTTCGACTCCTGCGCCGCTCCGCtc
Downstream region at tRNA end position 
ccctcgcccc
Secondary structure (Cloverleaf model)
>WENV183661882	SeC	TCA
                   c      GCtc ccctcgcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G          T C
                    A     C G T C C     A
        C C        T      | + | | |     G
      G     C G G G       G T A G G     C
      G       | |                   T T
      T     C C C A
        G G        G     TGAGGTCGTGTAACCCACGGCTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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