The detailed information of tRNA gene sequence


Sequence ID>WENV183664148
Genome IDORJL010348800
Search identical group
Phylum/Class[ORJL] groundwater metagenome; groundwater
Species
Start position on genome 6838
End posion on genome 6932
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttaaagatcc
tRNA gene sequence 
GGAGAAGGAAGGTGCCCGGTGGTGCCGCTGGTCTTCAAAACCAGTCTGGGGATCGTAAGG
TCCCCGGAGGGTTCGACTCCCTCCCTTCTCCGCCA
Downstream region at tRNA end position 
aagacctgcc
Secondary structure (Cloverleaf model)
>WENV183664148	SeC	TCA
                   c      GCCA aagacctgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          T C
                    A     C T C C C     A
      C C C        A      | | | | |     G
    G       G T G G       G A G G G     C
    G       + + | |                 T T
    T       T G C C
      G G          G     TCTGGGGATCGTAAGGTCCCCG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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