The detailed information of tRNA gene sequence


Sequence ID>ENV08000335
Genome IDABMA01005849
Search identical group
Phylum/Classmicrobial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Kingman Atoll (Northern LineIslands)
Species
Start position on genome 120
End posion on genome 45
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttttttattt
tRNA gene sequence 
CGGGGTGTAGCTTAGTCAGGTTAAAGTGCGCGTCTGGGGGGCGCGAGAGCGGTGGTTCGA
ATCCACTCACCCCGACtt
Downstream region at tRNA end position 
tatttcatta
Secondary structure (Cloverleaf model)
>ENV08000335	Pro	GGG
                   t      ACtt tatttcatta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C A C C     A
    C T G A        A      + | | | |     G
  A         T T C G       G G T G G     C
  G         | | | +                 T T
  G         A A G T
    T T A          G     AGAGC
                    C - G
                    G - C
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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