The detailed information of tRNA gene sequence


Sequence ID>ENV08000338
Genome IDABMA01008402
Search identical group
Phylum/Classmicrobial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Kingman Atoll (Northern LineIslands)
Species
Start position on genome 27
End posion on genome 101
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cgccaagcgc
tRNA gene sequence 
GGCCCGTTCGTCTATCGGTTAGGACGCCAGGTTTTCAACCTGGAAAGAGGGGTTCGATTC
CCCTACGGGCTGCCA
Downstream region at tRNA end position 
ttggcgtgac
Secondary structure (Cloverleaf model)
>ENV08000338	Glu	TTC
                   c      GCCA ttggcgtgac
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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