The detailed information of tRNA gene sequence


Sequence ID>WENV183670084
Genome IDORJL010906650
Search identical group
Phylum/Class[ORJL] groundwater metagenome; groundwater
Species
Start position on genome 270
End posion on genome 178
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggctcgccgc
tRNA gene sequence 
GGAGCGGCACGGGCCCGGTGGCCCAACTGGTCTTCAAAACCAGTCCGGTCGTGTAACCCA
CGGCTTGCCCGGTTCGACTCCGGGGCCGCTCCGtct
Downstream region at tRNA end position 
ccgctcaggg
Secondary structure (Cloverleaf model)
>WENV183670084	SeC	TCA
                   c      Gtct ccgctcaggg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G          T C
                    A     G G G C C     A
        C C        C      | | | | |     G
      G     C G G G       C C C G G     C
      G       | |                   T T
      T     C C C A
        G G        A     TCCGGTCGTGTAACCCACGGCTTG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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