The detailed information of tRNA gene sequence


Sequence ID>WENV183671904
Genome IDORJL011113982
Search identical group
Phylum/Class[ORJL] groundwater metagenome; groundwater
Species
Start position on genome 4659
End posion on genome 4564
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ctgagttgcg
tRNA gene sequence 
GGAGAGTGATGGGTGCCTGGTGGTCCTCGCGGTCTTCAAAACCGCCGTCGGCTCGTTTAC
GCGCCGAGGAAGGTTCGATTCCTTCCCTCTCCGCCA
Downstream region at tRNA end position 
gttctgagaa
Secondary structure (Cloverleaf model)
>WENV183671904	SeC	TCA
                   g      GCCA gttctgagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T   C          T T
                    G     C T T C C     A
    C C G T        A      | | | | |     G
  T         G G G T       G A A G G     C
  G         + | |                   T T
  G         T C C T
    T G G          C     CGTCGGCTCGTTTACGCGCCGAG
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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