The detailed information of tRNA gene sequence


Sequence ID>WENV183672702
Genome IDORJL011201018
Search identical group
Phylum/Class[ORJL] groundwater metagenome; groundwater
Species
Start position on genome 18
End posion on genome 117
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggcggaaaac
tRNA gene sequence 
GGGGGAGCGGAGGGGTCCCGGTGGGCTCCGCGGACTTCAAATCCGTTGGTGGGCGCCTTG
CGGTGTCCATGGTGGGTTCGACTCCCATGCGCTCCCGCCA
Downstream region at tRNA end position 
tatcctattc
Secondary structure (Cloverleaf model)
>WENV183672702	SeC	TCA
                   c      GCCA tatcctattc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     A   G
                     G - C
                     C - G          T C
                    G     T A C C C     A
    C C T G        G      + | | | |     G
  C         G G G A       G T G G G     C
  G           | +                   T T
  G         G C T C
    T G G          C     TGGTGGGCGCCTTGCGGTGTCCATG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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