The detailed information of tRNA gene sequence


Sequence ID>WENV183674045
Genome IDORJL011340381
Search identical group
Phylum/Class[ORJL] groundwater metagenome; groundwater
Species
Start position on genome 16297
End posion on genome 16393
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcatgatccc
tRNA gene sequence 
GGGAGTGGGTTCGGGCCGGTGCCCGGCCCGGTCTTCAAAACCGGTGGCGCGACGCTCGGC
GTCGCGCGGTGGGTTCGACTCCCATGCGCTCCCGCCA
Downstream region at tRNA end position 
tgcgatcgag
Secondary structure (Cloverleaf model)
>WENV183674045	SeC	TCA
                   c      GCCA tgcgatcgag
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     G   G          T C
                    G     T A C C C     A
      C C G        T      + | | | |     G
    G       G G C T       G T G G G     C
    G       | | | +                 T T
    T       C C G G
      G C          C     TGGCGCGACGCTCGGCGTCGCGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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