The detailed information of tRNA gene sequence


Sequence ID>ENV08000433
Genome IDABMD01060353
Search identical group
Phylum/Classviral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Christmas Atoll (Kirtimati; Northern Line Islands)
Species
Start position on genome 13
End posion on genome 105
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taaagcttgt
tRNA gene sequence 
GGTGAGATGGGTGAGTTGGTTTAAACCAGGAGTTTGCTAAACTTCCGTAGTATTTAACTA
TGCTACCGAGGGTTCGAATCCCTCTCTCACGCAat
Downstream region at tRNA end position 
taattaaagt
Secondary structure (Cloverleaf model)
>ENV08000433	Ser	GCT
                   t      CAat taattaaagt
                     G   G
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTAGTATTTAACTATGCTACC
                    G - C
                    G + T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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