The detailed information of tRNA gene sequence


Sequence ID>WENV183674462
Genome IDORJL011392611
Search identical group
Phylum/Class[ORJL] groundwater metagenome; groundwater
Species
Start position on genome 232
End posion on genome 135
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atcgccgcaa
tRNA gene sequence 
GGGAGTGCGTGCCGGCCGGTGCCGGCCCCGGTCTTCAACACCGGTGACGCGGCGCAGCAG
CGTCGCGTGGGGGGTTCGACTCCCATGCGCTCCCGCCA
Downstream region at tRNA end position 
ccgcggaacc
Secondary structure (Cloverleaf model)
>WENV183674462	SeC	TCA
                   a      GCCA ccgcggaacc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     C - G          T C
                    G     T A C C C     A
      C C G        T      +   | | |     G
    G       G C C G       G G G G G     C
    G       | | | |                 T T
    T       C G G C
      G C          C     TGACGCGGCGCAGCAGCGTCGCGTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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