The detailed information of tRNA gene sequence


Sequence ID>WENV183676337
Genome IDORJL011611481
Search identical group
Phylum/Class[ORJL] groundwater metagenome; groundwater
Species
Start position on genome 198
End posion on genome 292
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ctcgttaacG
tRNA gene sequence 
GACGGGGAATGCGGCCCGGTGGCGCACCCGGACTTCAAATCCGGGAGAAGGTGCTAAGCA
TCTTTGGTGGGTTCGACTCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
ctcaccagga
Secondary structure (Cloverleaf model)
>WENV183676337	SeC	TCA
                   G      GCCA ctcaccagga
                     G - C
                     A   C
                     C   T
                     G - C
                     G - C
                     G - C
                     G - C          T C
                    A     C A C C C     A
      C C G        A      | | | | |     G
    C       G C G T       G T G G G     C
    G       | | | |                 T T
    G       C G C A
      T G G        C     GAGAAGGTGCTAAGCATCTTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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