The detailed information of tRNA gene sequence


Sequence ID>WENV183676394
Genome IDORJL011617758
Search identical group
Phylum/Class[ORJL] groundwater metagenome; groundwater
Species
Start position on genome 962
End posion on genome 1059
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cctcacgtat
tRNA gene sequence 
GGGAGTGGATGGGTCCTGGTGGGCCTCGCGGTCTTCAAAACCGTTGCGACGGCAGTCGCG
TGTCGTTGGGTGGGTTCGACTCCCACGCACTCCCGCCA
Downstream region at tRNA end position 
cattatatag
Secondary structure (Cloverleaf model)
>WENV183676394	SeC	TCA
                   t      GCCA cattatatag
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T C
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       + | | +                 T T
    T       G C C T
      G G          C     TGCGACGGCAGTCGCGTGTCGTTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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