The detailed information of tRNA gene sequence


Sequence ID>WENV183676429
Genome IDORJL011623751
Search identical group
Phylum/Class[ORJL] groundwater metagenome; groundwater
Species
Start position on genome 641
End posion on genome 738
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttgatcctgt
tRNA gene sequence 
GGAAGTGGATAGGGCACTGGTGGCTCTCCCGGACTTCAAATCCGGTGTGCCGTCTGAGCA
AGTCGGCATGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
ttttcttatt
Secondary structure (Cloverleaf model)
>WENV183676429	SeC	TCA
                   t      GCCA ttttcttatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        T      + | | | |     G
    T       G G G A       G T G G G     C
    G       | + | |                 T T
    G       C T C T
      T G G        C     TGTGCCGTCTGAGCAAGTCGGCAT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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