The detailed information of tRNA gene sequence


Sequence ID>WENV183677263
Genome IDORJL011732570
Search identical group
Phylum/Class[ORJL] groundwater metagenome; groundwater
Species
Start position on genome 403
End posion on genome 306
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtacgttccc
tRNA gene sequence 
GGAGGTGCAAGGGTCCCGGTGGGTCCCATGGTCTTCAAAACCATCGTAGGGTGCTGAGAG
GCGCCCTGGGCGGGTTCGACTCCCGTGCATCTCCGCCA
Downstream region at tRNA end position 
ttgttctctg
Secondary structure (Cloverleaf model)
>WENV183677263	SeC	TCA
                   c      GCCA ttgttctctg
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     T - A
                     G - C
                     C - G          T C
                    A     T G C C C     A
      C C C        A      + | | | |     G
    G       T G G G       G C G G G     C
    G       + + | |                 T T
    T       G T C C
      G G          C     CGTAGGGTGCTGAGAGGCGCCCTGG
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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