The detailed information of tRNA gene sequence


Sequence ID>WENV183678463
Genome IDORJL011882431
Search identical group
Phylum/Class[ORJL] groundwater metagenome; groundwater
Species
Start position on genome 641
End posion on genome 545
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tttcaaacag
tRNA gene sequence 
GGGGGCGAATAAGTCCCGGTGGGCTTCGCGGACTTCAACTCCGTCGGGGGCCATTAATAA
TGTCTTCGGTGGGTTCGACACCCATTCGCTCCCGCCA
Downstream region at tRNA end position 
cttacctcga
Secondary structure (Cloverleaf model)
>WENV183678463	SeC	TCA
                   g      GCCA cttacctcga
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T          A C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A A       G T G G G     C
    G       + | | |                 T T
    T       G C T T
      G G          C     CGGGGGCCATTAATAATGTCTTCG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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