The detailed information of tRNA gene sequence


Sequence ID>ENV08000562
Genome IDABMF01069174
Search identical group
Phylum/Classsaltern metagenome; viral fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 107
End posion on genome 24
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnnnnttaaa
tRNA gene sequence 
GGTGGGGTTCCCGAGCGGCCAAAGGGATCAGACTGTAAATCTGACGCGAAAGCTTCGCTG
GTTCGAATCCAGCCCCCACCACCA
Downstream region at tRNA end position 
agaatttcaa
Secondary structure (Cloverleaf model)
>ENV08000562	Tyr	GTA
                   a      ACCA agaatttcaa
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        T      | | | | |     G
    G       G C C C       G C T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGCGAAAGCTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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