The detailed information of tRNA gene sequence


Sequence ID>WENV183700669
Genome IDPDMW01071972
Search identical group
Phylum/Class[PDMW] marine metagenome; viruses from water sample; < 0.22 micron filtered, nuclease treated, low buoyant density
Species
Start position on genome 1670
End posion on genome 1594
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tctgtatttg
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCACCTGCCTGTCACGCAGGGGGCCGAGGGTTCGAG
TCCCTTCACTCCCGCCA
Downstream region at tRNA end position 
aatgctccgt
Secondary structure (Cloverleaf model)
>WENV183700669	Asp	GTC
                   g      GCCA aatgctccgt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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