The detailed information of tRNA gene sequence


Sequence ID>WENV183700905
Genome IDPDMW01156239
Search identical group
Phylum/Class[PDMW] marine metagenome; viruses from water sample; < 0.22 micron filtered, nuclease treated, low buoyant density
Species
Start position on genome 204
End posion on genome 289
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcttaaacct
tRNA gene sequence 
GGAGAGGTGGTCGAGTGGTTTATGGCTCTGGTCTTGAAAACCAGCGAGGTGAAAGCCTCC
GTGAGTTCGAATCTCACCCTCTCCGCtt
Downstream region at tRNA end position 
tgccnnnnnn
Secondary structure (Cloverleaf model)
>WENV183700905	Ser	TGA
                   t      GCtt tgccnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G A G     C
    G       + | + |                 T T
    T       T G G C
      T T A        T     CGAGGTGAAAGCCTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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