The detailed information of tRNA gene sequence


Sequence ID>WENV183701058
Genome IDPDMW01223618
Search identical group
Phylum/Class[PDMW] marine metagenome; viruses from water sample; < 0.22 micron filtered, nuclease treated, low buoyant density
Species
Start position on genome 1414
End posion on genome 1340
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tggtattttt
tRNA gene sequence 
GGTCCCTTCGTCTATTGGTTAGGACACGTGGTTTTCATCCTCGAAAGAGGGGTTCGATTC
CCCTAGGGACCGCCA
Downstream region at tRNA end position 
gacacaaacg
Secondary structure (Cloverleaf model)
>WENV183701058	Glu	TTC
                   t      GCCA gacacaaacg
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      T T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAG
                    C - G
                    G - C
                    T   T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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