The detailed information of tRNA gene sequence


Sequence ID>ENV08000701
Genome IDABMI01004079
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 33
End posion on genome 108
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cccgcccatc
tRNA gene sequence 
GGGTCGTTAGCTCAGTTGGTAGAGCGCTTCGTTTACACCGAAGATGTCGGGAGTTCGAGC
CTCTCACGACCCACCA
Downstream region at tRNA end position 
tttccccagt
Secondary structure (Cloverleaf model)
>ENV08000701	Val	TAC
                   c      ACCA tttccccagt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          C G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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