The detailed information of tRNA gene sequence


Sequence ID>WENV183701220
Genome IDPDMW01320281
Search identical group
Phylum/Class[PDMW] marine metagenome; viruses from water sample; < 0.22 micron filtered, nuclease treated, low buoyant density
Species
Start position on genome 180
End posion on genome 106
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcgctccatt
tRNA gene sequence 
GGTCTGGTAGTTCAGTTGGTTAGAATACATGCCTGTCACGCATGGGGTCGCGGGTTCGAA
TCCCGTCCAGACCGCaa
Downstream region at tRNA end position 
cttgccttcc
Secondary structure (Cloverleaf model)
>WENV183701220	Asp	GTC
                   t      GCaa cttgccttcc
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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