The detailed information of tRNA gene sequence


Sequence ID>ENV08000703
Genome IDABMI01005788
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 42
End posion on genome 116
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
ggttcaaccc
tRNA gene sequence 
TGGGGTATGGTGTAATTGGCAACACGGAGGTTTCTGGTACCTTTGTTCTTGGTTCGAGTC
CAGGTACCCCAGCAA
Downstream region at tRNA end position 
ggaaaaaaan
Secondary structure (Cloverleaf model)
>ENV08000703	Gln	CTG
                   c      GCAA ggaaaaaaan
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     G G A C C     A
      T A A        G      | + | | |     G
    T       T G T G       C T T G G     C
    G       | | | |                 T T
    G       A C A C
      C A          G     TGTT
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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