The detailed information of tRNA gene sequence


Sequence ID>WENV183701373
Genome IDPDMX01004063
Search identical group
Phylum/Class[PDMX] marine metagenome; viruses from water sample; < 0.22 micron filtered, nuclease treated
Species
Start position on genome 250
End posion on genome 335
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcttaaacct
tRNA gene sequence 
GGAGAGGTGGTCGAGTGGTTTATGGCTCTGGTCTTGAAAACCAGCGAGGTGAAAGCCTCC
GTGAGTTCGAATCTCACCCTCTCCGCtt
Downstream region at tRNA end position 
tgcccgaata
Secondary structure (Cloverleaf model)
>WENV183701373	Ser	TGA
                   t      GCtt tgcccgaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G A G     C
    G       + | + |                 T T
    T       T G G C
      T T A        T     CGAGGTGAAAGCCTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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