The detailed information of tRNA gene sequence


Sequence ID>WENV183701561
Genome IDPDMX01169549
Search identical group
Phylum/Class[PDMX] marine metagenome; viruses from water sample; < 0.22 micron filtered, nuclease treated
Species
Start position on genome 204
End posion on genome 128
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
atacttataa
tRNA gene sequence 
GGGCCTATAGCTCAATCGGTTAGAGCATCTGTCTCATAAACAGAAGGTTTCTGGTTCAAG
TCCAGGTGGGCCCACCA
Downstream region at tRNA end position 
atcaaactaa
Secondary structure (Cloverleaf model)
>WENV183701561	Ile2	CAT
                   a      ACCA atcaaactaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G A C C     A
      T A A        A      + | | | |     A
    C       C T C G       T C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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