The detailed information of tRNA gene sequence


Sequence ID>ENV08000707
Genome IDABMI01007481
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 118
End posion on genome 32
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnnnggggc
tRNA gene sequence 
GGTACCGTGTCCGAGCGGCCTAAGGTGCAACTCTCGAAAAGTTGTGTGGTTAACGCCCAC
CGTGGGTTCAAATCCCACCGGTACCGCgc
Downstream region at tRNA end position 
cggtcgggat
Secondary structure (Cloverleaf model)
>ENV08000707	Ser	CGA
                   c      GCgc cggtcgggat
                     G - C
                     G - C
                     T - A
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G T G G G     C
    G         | |                   T T
    C       A G G T
      C T A        G     TGTGGTTAACGCCCACC
                    C - G
                    A - T
                    A - T
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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