The detailed information of tRNA gene sequence


Sequence ID>ENV08000709
Genome IDABMI01007694
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 109
End posion on genome 34
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttgatagaga
tRNA gene sequence 
GGCCCCATCGTTTAGCGGCCTAGGACGCCGCCCTTTCACGGCGGTAGCACGGGTTCGAAT
CCCGTTGGGGTCACGA
Downstream region at tRNA end position 
aagcgttggg
Secondary structure (Cloverleaf model)
>ENV08000709	Glu	TTC
                   a      ACGA aagcgttggg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T T T G       A C G G G     C
    G       + + | |                 T T
    C       G G A C
      C T A        G     TAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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