The detailed information of tRNA gene sequence


Sequence ID>ENV08000711
Genome IDABMI01009033
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 37
End posion on genome 109
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cttcaggtta
tRNA gene sequence 
GCCGGTGTAGCTCAGGGGTAGAGCGTTTCCTTGGTAAGGAAGAGGCCACGGGTTCAAATC
CCGTCATTGGCTCtg
Downstream region at tRNA end position 
aaacagacta
Secondary structure (Cloverleaf model)
>ENV08000711	Thr	GGT
                   a      TCtg aaacagacta
                     G - C
                     C - G
                     C - G
                     G + T
                     G + T
                     T - A
                     G - C          T A
                    T     T G C C C     A
        G A        A      | | | | |     A
      G     C T C G       A C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGCC
                    T + G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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