The detailed information of tRNA gene sequence


Sequence ID>ENV08000717
Genome IDABMI01012034
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 27
End posion on genome 103
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
cgcggcacat
tRNA gene sequence 
GGCCCCGTGGCTCAACTGGATAGAGCAATCCCCTCCTAAGGGATAGGTTGCAGGTTCAAG
TCCTGCCGGGGTCACCA
Downstream region at tRNA end position 
aaaaaaaccc
Secondary structure (Cloverleaf model)
>ENV08000717	Arg	CCT
                   t      ACCA aaaaaaaccc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      C A A        G      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    A - T
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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