The detailed information of tRNA gene sequence


Sequence ID>WENV183703020
Genome IDPDVJ01001671
Search identical group
Phylum/Class[PDVJ] alkali sediment metagenome; glacial lake sediment
Species
Start position on genome 2745
End posion on genome 2651
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atgtgaaatt
tRNA gene sequence 
GGAAGTGGACAGGTTCTGGTGGGCCTCCTGGACTTCAAATCCAGTGACGGGCAGACGATG
TCCGTGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
gttcagagag
Secondary structure (Cloverleaf model)
>WENV183703020	SeC	TCA
                   t      GCCA gttcagagag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      T C T        C      + | | | |     G
    G       T G G A       G T G G G     C
    G       + | | |                 T T
    T       G C C T
      G G          C     TGACGGGCAGACGATGTCCGTG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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