The detailed information of tRNA gene sequence


Sequence ID>WENV183703975
Genome IDPDVJ01080667
Search identical group
Phylum/Class[PDVJ] alkali sediment metagenome; glacial lake sediment
Species
Start position on genome 59
End posion on genome 154
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
caatgcgcgt
tRNA gene sequence 
GGAAGGACTTCGTCCCCGGAGGGGCGGCCGGGCTTCAAACCCGGTAGGGGCCGTCAGGCG
GTTCCTGGTGGGTTCGACTCCCACGTCCTTCCGCCA
Downstream region at tRNA end position 
acttgaggag
Secondary structure (Cloverleaf model)
>WENV183703975	SeC	TCA
                   t      GCCA acttgaggag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G          T C
                    T     C A C C C     A
      C C C        T      | | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    A       G G C G
      G G          G     TAGGGGCCGTCAGGCGGTTCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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