The detailed information of tRNA gene sequence


Sequence ID>WENV183703984
Genome IDPDVJ01082961
Search identical group
Phylum/Class[PDVJ] alkali sediment metagenome; glacial lake sediment
Species
Start position on genome 220
End posion on genome 305
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgtgcatgT
tRNA gene sequence 
GGAGCGGTGGCCGAGTTGGTAAGGCAGCGGCTTGCTAAGCCGTACATCCGAAAGGGTGCG
GGAGTTCGAGTCTCCCTCGCTCCGTgt
Downstream region at tRNA end position 
ggaagaggnn
Secondary structure (Cloverleaf model)
>WENV183703984	Ser	GCT
                   T      GTgt ggaagaggnn
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G + T          T G
                    T     C C C T C     A
      T G A        G      | | | | |     G
    T       G C C G       G G G A G     C
    G         | | |                 T T
    G       A G G C
      T A          A     ACATCCGAAAGGGTGC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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