The detailed information of tRNA gene sequence


Sequence ID>ENV08000734
Genome IDABMI01030941
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 10
End posion on genome 93
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ngggaatcac
tRNA gene sequence 
GCGGAAGTGGTGGAACGGCAGACACGCTGCGCTTAGGACGCAGTGCCTTCGGGCGTGCGG
GTTCAACTCCCGCCTTCCGCACCC
Downstream region at tRNA end position 
gtttacgtgc
Secondary structure (Cloverleaf model)
>ENV08000734	Leu	TAG
                   c      ACCC gtttacgtgc
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T C
                    T     C G C C C     A
      C A A        G      | | | | |     A
    G       G G T G       G C G G G     C
    G         | | |                 T T
    C       A C A C
      A G          G     TGCCTTCGGGCGT
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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