The detailed information of tRNA gene sequence


Sequence ID>ENV08000754
Genome IDABMI01078031
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 103
End posion on genome 19
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
nnnnnnnttg
tRNA gene sequence 
GCCGACGTGGTGGAATTGGTAGACACGCTATCTTGAGGGGGTAGTGGCGAAAGCTGTGCG
AGTTCGAGTCTCGCCGTCGGCACCA
Downstream region at tRNA end position 
atcaaaaaat
Secondary structure (Cloverleaf model)
>ENV08000754	Leu	GAG
                   g      ACCA atcaaaaaat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     C G C T C     A
      T A A        G      | | | | |     G
    T       G G T G       G C G A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGGCGAAAGCTGT
                    C - G
                    T - A
                    A - T
                    T + G
                    C - G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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