The detailed information of tRNA gene sequence


Sequence ID>ENV08000755
Genome IDABMI01078554
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 19
End posion on genome 94
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcaccatcac
tRNA gene sequence 
GGACCTGTGGAGCAGTTTGGAGTGCTCGCCACCCTGTCAAGGTGGAGGTCGCGGGTTCAA
ATCCCGTCAGGTCCGCtc
Downstream region at tRNA end position 
acggtcaggn
Secondary structure (Cloverleaf model)
>ENV08000755	Asp	GTC
                   c      GCtc acggtcaggn
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
    T T G A        G      + | | | |     A
  T         C G A G       G C G G G     C
  G         | | | |                 T T
  G         G C T C
    A G T          G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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