The detailed information of tRNA gene sequence


Sequence ID>ENV08000763
Genome IDABMI01097497
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 15
End posion on genome 89
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ctgggggcat
tRNA gene sequence 
GGGCCTGTAGCTCAGCTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGAGGTTCAAG
TCCTCCCAGGCCCACtc
Downstream region at tRNA end position 
acccagtccc
Secondary structure (Cloverleaf model)
>ENV08000763	Ile	GAT
                   t      ACtc acccagtccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C C T C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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