The detailed information of tRNA gene sequence


Sequence ID>ENV08000776
Genome IDABMI01157640
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 92
End posion on genome 17
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnnnntga
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCAGCGGTTCGATC
CCGCTAGGCTCCACCA
Downstream region at tRNA end position 
ttcgacggcg
Secondary structure (Cloverleaf model)
>ENV08000776	Ala	TGC
                   a      ACCA ttcgacggcg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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