The detailed information of tRNA gene sequence


Sequence ID>ENV08000784
Genome IDABMJ01000515
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 136
End posion on genome 51
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ntccttaact
tRNA gene sequence 
GCCCGGGTGGTGGAATGGTAGACACGCCGGACTTAAAATCCGGTGCTCCGAAAGGGGTGT
GAGGGTTCAAGTCCCTCCCCGGGTACag
Downstream region at tRNA end position 
aaaaaaaaaa
Secondary structure (Cloverleaf model)
>ENV08000784	Leu	TAA
                   t      ACag aaaaaaaaaa
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    G       G G T G       G A G G G     C
    G         | | |                 T T
    T       A C A C
      A G          G     TGCTCCGAAAGGGGTGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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