The detailed information of tRNA gene sequence


Sequence ID>ENV08000786
Genome IDABMJ01003849
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 24
End posion on genome 100
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
taatcaccgg
tRNA gene sequence 
TACTTTGTAGCTCAGTTGGTTAGAGCCGGGGATTTTTAACCCCCAGGTCGGGGGTTCGAG
TCCCCTCAAAGTAGCAA
Downstream region at tRNA end position 
aaattatagt
Secondary structure (Cloverleaf model)
>ENV08000786	Lys	TTT
                   g      GCAA aaattatagt
                     T - A
                     A - T
                     C - G
                     T - A
                     T - A
                     T - A
                     G - C          T G
                    T     T C C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     AGGTC
                    G - C
                    G - C
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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