The detailed information of tRNA gene sequence


Sequence ID>ENV08000789
Genome IDABMJ01020011
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 21
End posion on genome 103
Amino Acid Undet
Anticodon ???
Upstream region at tRNA start position 
tgtggcgtaa
tRNA gene sequence 
GCCTCGGTGGTGAATTGGTATACACGAGGGACTCAAATCCCTTGCCGTAAGGCGTGTCGG
TTCGACCCCGACCCGAGGCACCA
Downstream region at tRNA end position 
ncttttcttg
Secondary structure (Cloverleaf model)
>ENV08000789	Undet	???
                   a      ACCA ncttttcttg
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          C C
                    T     C A G C C     A
      T T A        G      | | | | |     G
    G       A G T G       G T C G G     C
    G         | | |                 T T
    T       A C A C
      A T          G     GCCGTAAGGCGT
                    A - T
                    G + T
                    G - C
                    G - C
                    A   C
                  C       T
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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