The detailed information of tRNA gene sequence


Sequence ID>ENV08000791
Genome IDABMJ01022126
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 89
End posion on genome 16
Amino Acid Pseudo
Anticodon TTG
Upstream region at tRNA start position 
ccgctaaaaa
tRNA gene sequence 
TGAGATATGATGTAAAGGTAGCATAGAAAACTTTGACTTTTCTTGTATAGGTTCGACCCC
TATTATCTCAACAA
Downstream region at tRNA end position 
ttgaaaataa
Secondary structure (Cloverleaf model)
>ENV08000791	Pseudo	TTG
                   a      ACAA ttgaaaataa
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     A - T          C C
                    T     T A T C C     A
        A A        G      | | | | |     G
      A     T G T A       A T A G G     C
      G     + | | |                 T T
      G     G C A T
        T A        A     TTGT
                    G - C
                    A - T
                    A - T
                    A - T
                    A - T
                  C       C
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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